HCSGD entry for CDHR1

1. General information

Official gene symbolCDHR1
Entrez ID92211
Gene full namecadherin-related family member 1
Other gene symbolsCORD15 PCDH21 PRCAD RP65
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0005887Integral component of plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0042622Photoreceptor outer segment membraneIEAcellular_component
GO:0045494Photoreceptor cell maintenanceIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.90467406630.45007121310.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0611650488
GSE13712_SHEARDown-0.0702585534
GSE13712_STATICDown-0.0264840402
GSE19018Down-0.0187287320
GSE19899_A1Up0.0177054780
GSE19899_A2Up0.1299653159
PubMed_21979375_A1Down-0.1106560337
PubMed_21979375_A2Down-0.0172498923
GSE35957Up0.1333269702
GSE36640Up0.0670965133
GSE54402Down-0.0113925967
GSE9593Up0.1596310507
GSE43922Up0.0103586115
GSE24585Down-0.7124106925
GSE37065Up0.0258430347
GSE28863_A1Down-0.2018175436
GSE28863_A2Down-0.1076080048
GSE28863_A3Up0.1212905221
GSE28863_A4Up0.0569410296
GSE48662Up0.1075615710

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-93-5pMIMAT0000093MIRT048768CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.