HCSGD entry for C12orf65
1. General information
| Official gene symbol | C12orf65 |
|---|---|
| Entrez ID | 91574 |
| Gene full name | chromosome 12 open reading frame 65 |
| Other gene symbols | COXPD7 SPG55 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003747 | Translation release factor activity | IEA | molecular_function |
| GO:0005739 | Mitochondrion | NAS | cellular_component |
| GO:0008219 | Cell death | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9389295467 | 0.1187431709 | 0.9999902473 | 0.6620978642 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1722537165 |
| GSE13712_SHEAR | Up | 0.0135609987 |
| GSE13712_STATIC | Down | -0.1148956391 |
| GSE19018 | Up | 0.0382148686 |
| GSE19899_A1 | Down | -0.1071548170 |
| GSE19899_A2 | Down | -0.4881931393 |
| PubMed_21979375_A1 | Down | -0.8971837319 |
| PubMed_21979375_A2 | Down | -0.8913222232 |
| GSE35957 | Down | -0.3333243538 |
| GSE36640 | Down | -0.3740354501 |
| GSE54402 | Down | -0.2536574779 |
| GSE9593 | Up | 0.0963754128 |
| GSE43922 | Up | 0.0087576224 |
| GSE24585 | Up | 0.1650701864 |
| GSE37065 | Down | -0.1773041475 |
| GSE28863_A1 | Up | 0.0382514085 |
| GSE28863_A2 | Down | -0.1186258473 |
| GSE28863_A3 | Up | 0.1037492602 |
| GSE28863_A4 | Up | 0.0498511571 |
| GSE48662 | Up | 0.1834565919 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020179 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024748 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026416 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043547 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046767 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
