HCSGD entry for SYNGR3
1. General information
| Official gene symbol | SYNGR3 |
|---|---|
| Entrez ID | 9143 |
| Gene full name | synaptogyrin 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008021 | Synaptic vesicle | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA NAS | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0031594 | Neuromuscular junction | IEA | cellular_component |
| GO:0032411 | Positive regulation of transporter activity | ISS | biological_process |
| GO:0042169 | SH2 domain binding | IEA | molecular_function |
| GO:0047485 | Protein N-terminus binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1470005129 | 0.1684492648 | 0.7682687711 | 0.7935838733 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3815975684 |
| GSE13712_SHEAR | Down | -0.0705263115 |
| GSE13712_STATIC | Down | -0.0452455759 |
| GSE19018 | Up | 0.1563530995 |
| GSE19899_A1 | Down | -1.2117731010 |
| GSE19899_A2 | Down | -0.9970979972 |
| PubMed_21979375_A1 | Up | 0.4559273785 |
| PubMed_21979375_A2 | Down | -0.5036642836 |
| GSE35957 | Down | -0.5138602027 |
| GSE36640 | Up | 0.6496204138 |
| GSE54402 | Down | -1.0700413931 |
| GSE9593 | Up | 0.0367642315 |
| GSE43922 | Up | 0.0441876005 |
| GSE24585 | Up | 0.4146089654 |
| GSE37065 | Up | 0.2543539122 |
| GSE28863_A1 | Down | -0.2320103823 |
| GSE28863_A2 | Down | -0.0622324038 |
| GSE28863_A3 | Up | 0.4288923806 |
| GSE28863_A4 | Up | 0.1906726046 |
| GSE48662 | Up | 0.2071195441 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016883 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
