HCSGD entry for R3HDM4
1. General information
| Official gene symbol | R3HDM4 |
|---|---|
| Entrez ID | 91300 |
| Gene full name | R3H domain containing 4 |
| Other gene symbols | C19orf22 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8085471677 | 0.2790665970 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2864310036 |
| GSE13712_SHEAR | Down | -0.2601386219 |
| GSE13712_STATIC | Up | 0.0470095478 |
| GSE19018 | Down | -0.1651709212 |
| GSE19899_A1 | Down | -0.1529605768 |
| GSE19899_A2 | Up | 0.2904939393 |
| PubMed_21979375_A1 | Up | 0.1738439298 |
| PubMed_21979375_A2 | Down | -0.1117655806 |
| GSE35957 | Down | -0.0556133690 |
| GSE36640 | Up | 0.0948350690 |
| GSE54402 | Up | 0.1463525606 |
| GSE9593 | Up | 0.2716796966 |
| GSE43922 | Up | 0.0443858825 |
| GSE24585 | Down | -0.1319673745 |
| GSE37065 | Down | -0.1754788141 |
| GSE28863_A1 | Down | -0.1297933454 |
| GSE28863_A2 | Down | -0.3024311381 |
| GSE28863_A3 | Up | 0.0607136271 |
| GSE28863_A4 | Up | 0.1094991294 |
| GSE48662 | Up | 0.0778825696 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-151a-5p | MIMAT0004697 | MIRT019522 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020372 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030410 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-301b | MIMAT0004958 | MIRT036703 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049233 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
