HCSGD entry for TBX19
1. General information
| Official gene symbol | TBX19 |
|---|---|
| Entrez ID | 9095 |
| Gene full name | T-box 19 |
| Other gene symbols | TBS19 TPIT dJ747L4.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001158 | Enhancer sequence-specific DNA binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0009653 | Anatomical structure morphogenesis | TAS | biological_process |
| GO:0021983 | Pituitary gland development | IEA | biological_process |
| GO:0042127 | Regulation of cell proliferation | IEA | biological_process |
| GO:0045165 | Cell fate commitment | IEA | biological_process |
| GO:0045595 | Regulation of cell differentiation | IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0914368793 | 0.9551796170 | 0.6364381972 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2841464833 |
| GSE13712_SHEAR | Up | 0.3021900812 |
| GSE13712_STATIC | Up | 0.4739253327 |
| GSE19018 | Up | 0.3314023277 |
| GSE19899_A1 | Up | 0.0406070419 |
| GSE19899_A2 | Down | -0.0165526638 |
| PubMed_21979375_A1 | Up | 0.0739158316 |
| PubMed_21979375_A2 | Up | 0.1487418521 |
| GSE35957 | Up | 0.0094523964 |
| GSE36640 | Up | 0.7430246680 |
| GSE54402 | Up | 0.0619615717 |
| GSE9593 | Down | -0.0552005049 |
| GSE43922 | Up | 0.1895232243 |
| GSE24585 | Up | 0.1125593775 |
| GSE37065 | Up | 0.2341805000 |
| GSE28863_A1 | Up | 0.0479622502 |
| GSE28863_A2 | Down | -0.0469301225 |
| GSE28863_A3 | Down | -0.0653092803 |
| GSE28863_A4 | Down | -0.2326744725 |
| GSE48662 | Up | 0.3613047999 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT003092 | Luciferase reporter assay//qRT-PCR | Functional MTI | 19296470 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017792 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019806 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
