HCSGD entry for ZNF598
1. General information
| Official gene symbol | ZNF598 |
|---|---|
| Entrez ID | 90850 |
| Gene full name | zinc finger protein 598 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1637473576 | 0.7922915581 | 0.8010057053 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0940862004 |
| GSE13712_SHEAR | Up | 0.1967452995 |
| GSE13712_STATIC | Down | -0.0582197138 |
| GSE19018 | Down | -0.0419165965 |
| GSE19899_A1 | Up | 0.1504831544 |
| GSE19899_A2 | Up | 0.5013097832 |
| PubMed_21979375_A1 | Up | 0.2814797699 |
| PubMed_21979375_A2 | Up | 0.7968742433 |
| GSE35957 | Up | 0.5206059412 |
| GSE36640 | Up | 0.0710073521 |
| GSE54402 | Up | 0.0571497010 |
| GSE9593 | Down | -0.0161624458 |
| GSE43922 | Up | 0.4222421166 |
| GSE24585 | Down | -0.4101926588 |
| GSE37065 | Down | -0.1460198699 |
| GSE28863_A1 | Down | -0.0995688947 |
| GSE28863_A2 | Down | -0.0405223453 |
| GSE28863_A3 | Up | 0.2048882170 |
| GSE28863_A4 | Up | 0.0649142437 |
| GSE48662 | Down | -0.1082819166 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017723 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031687 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037480 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039063 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043538 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044306 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT047372 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106a-5p | MIMAT0000103 | MIRT048355 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050619 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT051039 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
