HCSGD entry for CLDN9
1. General information
| Official gene symbol | CLDN9 |
|---|---|
| Entrez ID | 9080 |
| Gene full name | claudin 9 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005198 | Structural molecule activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005923 | Tight junction | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016338 | Calcium-independent cell-cell adhesion | ISS | biological_process |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0042802 | Identical protein binding | ISS | molecular_function |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
| GO:0070830 | Tight junction assembly | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3758663995 | 0.8494494624 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0324933715 |
| GSE13712_SHEAR | Up | 0.1844109582 |
| GSE13712_STATIC | Down | -0.0109600678 |
| GSE19018 | Up | 0.3836800430 |
| GSE19899_A1 | Up | 0.0052299944 |
| GSE19899_A2 | Down | -0.0115139302 |
| PubMed_21979375_A1 | Up | 0.0281107288 |
| PubMed_21979375_A2 | Down | -0.0131948390 |
| GSE35957 | Down | -0.1091214902 |
| GSE36640 | Up | 0.0856964015 |
| GSE54402 | Up | 0.0661428810 |
| GSE9593 | Up | 0.0598414630 |
| GSE43922 | Up | 0.1210694242 |
| GSE24585 | Up | 0.1479821045 |
| GSE37065 | Down | -0.0426882147 |
| GSE28863_A1 | Down | -0.2410888570 |
| GSE28863_A2 | Down | -0.0184131293 |
| GSE28863_A3 | Up | 0.2846467317 |
| GSE28863_A4 | Up | 0.0318090736 |
| GSE48662 | Up | 0.0256110878 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT045011 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
