HCSGD entry for LRSAM1
1. General information
| Official gene symbol | LRSAM1 |
|---|---|
| Entrez ID | 90678 |
| Gene full name | leucine rich repeat and sterile alpha motif containing 1 |
| Other gene symbols | CMT2P RIFLE TAL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000209 | Protein polyubiquitination | IDA | biological_process |
| GO:0004842 | Ubiquitin-protein ligase activity | IDA | molecular_function |
| GO:0005179 | Hormone activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0030163 | Protein catabolic process | IMP | biological_process |
| GO:0045806 | Negative regulation of endocytosis | IMP | biological_process |
| GO:0046755 | Viral budding | IMP | biological_process |
| GO:0051865 | Protein autoubiquitination | IDA | biological_process |
| GO:0070086 | Ubiquitin-dependent endocytosis | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2525859352 | 0.7313297861 | 0.9426222033 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1094669013 |
| GSE13712_SHEAR | Down | -0.2597878792 |
| GSE13712_STATIC | Down | -0.2707060934 |
| GSE19018 | Up | 0.3182524414 |
| GSE19899_A1 | Up | 0.0407387295 |
| GSE19899_A2 | Up | 0.1901635736 |
| PubMed_21979375_A1 | Up | 0.0168421074 |
| PubMed_21979375_A2 | Up | 0.2736067057 |
| GSE35957 | Down | -0.3384434316 |
| GSE36640 | Up | 0.3962418926 |
| GSE54402 | Up | 0.0271931915 |
| GSE9593 | Down | -0.1298129883 |
| GSE43922 | Up | 0.0368066527 |
| GSE24585 | Down | -0.0639192486 |
| GSE37065 | Down | -0.0271494585 |
| GSE28863_A1 | Up | 0.1516192484 |
| GSE28863_A2 | Up | 0.1690372699 |
| GSE28863_A3 | Up | 0.0213819737 |
| GSE28863_A4 | Down | -0.0611935135 |
| GSE48662 | Up | 0.4284973965 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
