HCSGD entry for CCNT2
1. General information
| Official gene symbol | CCNT2 |
|---|---|
| Entrez ID | 905 |
| Gene full name | cyclin T2 |
| Other gene symbols | CYCT2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000079 | Regulation of cyclin-dependent protein serine/threonine kinase activity | IEA | biological_process |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | TAS | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006367 | Transcription initiation from RNA polymerase II promoter | TAS | biological_process |
| GO:0006368 | Transcription elongation from RNA polymerase II promoter | TAS | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0007179 | Transforming growth factor beta receptor signaling pathway | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0019901 | Protein kinase binding | IEA | molecular_function |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0051301 | Cell division | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7010004141 | 0.1277450857 | 0.9999902473 | 0.6884476658 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1442143653 |
| GSE13712_SHEAR | Up | 0.1190023275 |
| GSE13712_STATIC | Up | 0.1537024608 |
| GSE19018 | Down | -0.3480753973 |
| GSE19899_A1 | Up | 0.0149387671 |
| GSE19899_A2 | Down | -0.0638341168 |
| PubMed_21979375_A1 | Up | 0.0201854923 |
| PubMed_21979375_A2 | Up | 0.1420710154 |
| GSE35957 | Down | -0.0531134273 |
| GSE36640 | Up | 0.0140458892 |
| GSE54402 | Down | -0.0190398984 |
| GSE9593 | Down | -0.0544796802 |
| GSE43922 | Down | -0.0402445228 |
| GSE24585 | Up | 0.6220566466 |
| GSE37065 | Up | 0.1791927727 |
| GSE28863_A1 | Down | -0.0586456396 |
| GSE28863_A2 | Up | 0.3851780837 |
| GSE28863_A3 | Down | -0.9088750969 |
| GSE28863_A4 | Down | -0.4140738120 |
| GSE48662 | Down | -0.6086385704 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001801 | Luciferase reporter assay//Reporter assay;Other | Non-Functional MTI | 15131085 |
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020397 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026073 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-22-3p | MIMAT0000077 | MIRT030643 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037376 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041987 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042585 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-204-5p | MIMAT0000265 | MIRT047016 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
