HCSGD entry for C12orf23
1. General information
| Official gene symbol | C12orf23 |
|---|---|
| Entrez ID | 90488 |
| Gene full name | chromosome 12 open reading frame 23 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8266643023 | 0.1728769386 | 0.9999902473 | 0.8047919880 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1743068740 |
| GSE13712_SHEAR | Down | -0.0110986325 |
| GSE13712_STATIC | Up | 0.0793458976 |
| GSE19018 | Up | 0.0905556357 |
| GSE19899_A1 | Up | 0.0268257647 |
| GSE19899_A2 | Down | -0.1910500836 |
| PubMed_21979375_A1 | Up | 0.1084089856 |
| PubMed_21979375_A2 | Up | 0.0355375244 |
| GSE35957 | Down | -0.0485421465 |
| GSE36640 | Up | 0.1617888548 |
| GSE54402 | Down | -0.0589739693 |
| GSE9593 | Down | -0.1789658626 |
| GSE43922 | Down | -0.0893072010 |
| GSE24585 | Up | 0.4454472670 |
| GSE37065 | Down | -0.1961960667 |
| GSE28863_A1 | Down | -0.1863521233 |
| GSE28863_A2 | Down | -0.2233533786 |
| GSE28863_A3 | Down | -0.7585724809 |
| GSE28863_A4 | Up | 0.3077528707 |
| GSE48662 | Down | -0.2008100846 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT003944 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004885 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004885 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
