HCSGD entry for ZSWIM1
1. General information
| Official gene symbol | ZSWIM1 |
|---|---|
| Entrez ID | 90204 |
| Gene full name | zinc finger, SWIM-type containing 1 |
| Other gene symbols | C20orf162 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9209367197 | 0.2164120170 | 0.9999902473 | 0.8958355031 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0049685677 |
| GSE13712_SHEAR | Up | 0.0271007379 |
| GSE13712_STATIC | Up | 0.0468928539 |
| GSE19018 | Up | 0.0746101293 |
| GSE19899_A1 | Down | -0.1434126024 |
| GSE19899_A2 | Down | -0.0009753884 |
| PubMed_21979375_A1 | Up | 0.0624590871 |
| PubMed_21979375_A2 | Up | 0.0955846590 |
| GSE35957 | Down | -0.0146963790 |
| GSE36640 | Up | 0.0975356533 |
| GSE54402 | Down | -0.2688609427 |
| GSE9593 | Down | -0.1213614037 |
| GSE43922 | Down | -0.2324376233 |
| GSE24585 | Up | 0.1453542784 |
| GSE37065 | Up | 0.1450742155 |
| GSE28863_A1 | Up | 0.0302387544 |
| GSE28863_A2 | Down | -0.3942868621 |
| GSE28863_A3 | Down | -0.3216345940 |
| GSE28863_A4 | Down | -0.2570946436 |
| GSE48662 | Down | -0.0890328535 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT048791 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
