HCSGD entry for SAPCD2
1. General information
| Official gene symbol | SAPCD2 |
|---|---|
| Entrez ID | 89958 |
| Gene full name | suppressor APC domain containing 2 |
| Other gene symbols | C9orf140 p42.3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9308921166 | 0.0202118651 | 0.9999902473 | 0.2753909938 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0070449268 |
| GSE13712_SHEAR | Down | -0.4827821123 |
| GSE13712_STATIC | Down | -0.2540569462 |
| GSE19018 | Down | -0.0161188484 |
| GSE19899_A1 | Down | -0.0805945684 |
| GSE19899_A2 | Down | -1.1688387828 |
| PubMed_21979375_A1 | Down | -0.5348783882 |
| PubMed_21979375_A2 | Down | -0.8042531607 |
| GSE35957 | Down | -0.9948005256 |
| GSE36640 | Down | -1.1779247565 |
| GSE54402 | Up | 0.0113012647 |
| GSE9593 | Down | -0.4829557134 |
| GSE43922 | Up | 0.0545814397 |
| GSE24585 | Down | -0.0565450814 |
| GSE37065 | Down | -0.1171483161 |
| GSE28863_A1 | Down | -0.0896477815 |
| GSE28863_A2 | Up | 0.1485586078 |
| GSE28863_A3 | Up | 0.3515956736 |
| GSE28863_A4 | Up | 0.1829950313 |
| GSE48662 | Down | -0.7154268872 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-222-3p | MIMAT0000279 | MIRT046610 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT046946 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
