HCSGD entry for AP3D1
1. General information
| Official gene symbol | AP3D1 |
|---|---|
| Entrez ID | 8943 |
| Gene full name | adaptor-related protein complex 3, delta 1 subunit |
| Other gene symbols | ADTD hBLVR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA TAS | cellular_component |
| GO:0006726 | Eye pigment biosynthetic process | TAS | biological_process |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0008089 | Anterograde axon cargo transport | ISS | biological_process |
| GO:0008565 | Protein transporter activity | IEA | molecular_function |
| GO:0010008 | Endosome membrane | IDA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0030117 | Membrane coat | IEA | cellular_component |
| GO:0033365 | Protein localization to organelle | IEA | biological_process |
| GO:0043195 | Terminal bouton | IEA | cellular_component |
| GO:0048007 | Antigen processing and presentation, exogenous lipid antigen via MHC class Ib | IEA | biological_process |
| GO:0048490 | Anterograde synaptic vesicle transport | ISS | biological_process |
| GO:0048499 | Synaptic vesicle membrane organization | IEA | biological_process |
| GO:0051138 | Positive regulation of NK T cell differentiation | IEA | biological_process |
| GO:0061088 | Regulation of sequestering of zinc ion | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0189594544 | 0.9817915771 | 0.3364691275 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3152595368 |
| GSE13712_SHEAR | Up | 0.1188203487 |
| GSE13712_STATIC | Down | -0.0012558076 |
| GSE19018 | Up | 0.0711069425 |
| GSE19899_A1 | Up | 0.1556647335 |
| GSE19899_A2 | Up | 0.6207090539 |
| PubMed_21979375_A1 | Up | 0.5039542132 |
| PubMed_21979375_A2 | Up | 0.5161037547 |
| GSE35957 | Up | 0.0906027992 |
| GSE36640 | Up | 0.0768776079 |
| GSE54402 | Up | 0.2079361928 |
| GSE9593 | Up | 0.5773138410 |
| GSE43922 | Up | 0.0336416068 |
| GSE24585 | Up | 0.0904675610 |
| GSE37065 | Down | -0.1968864478 |
| GSE28863_A1 | Up | 0.5830323323 |
| GSE28863_A2 | Up | 0.7394394037 |
| GSE28863_A3 | Up | 0.0456729925 |
| GSE28863_A4 | Up | 0.0666865339 |
| GSE48662 | Up | 0.2054559986 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001386 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT016660 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017505 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031574 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037730 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040050 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040843 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042149 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049814 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050521 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
