HCSGD entry for AP1M1
1. General information
| Official gene symbol | AP1M1 |
|---|---|
| Entrez ID | 8907 |
| Gene full name | adaptor-related protein complex 1, mu 1 subunit |
| Other gene symbols | AP47 CLAPM2 CLTNM MU-1A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005765 | Lysosomal membrane | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006892 | Post-Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0019886 | Antigen processing and presentation of exogenous peptide antigen via MHC class II | TAS | biological_process |
| GO:0030131 | Clathrin adaptor complex | IEA | cellular_component |
| GO:0030659 | Cytoplasmic vesicle membrane | TAS | cellular_component |
| GO:0030665 | Clathrin-coated vesicle membrane | IEA | cellular_component |
| GO:0032438 | Melanosome organization | IMP | biological_process |
| GO:0032588 | Trans-Golgi network membrane | TAS | cellular_component |
| GO:0035646 | Endosome to melanosome transport | IMP | biological_process |
| GO:0050690 | Regulation of defense response to virus by virus | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0914380799 | 0.8486234414 | 0.6364381972 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0634222580 |
| GSE13712_SHEAR | Up | 0.2817868121 |
| GSE13712_STATIC | Up | 0.3530264269 |
| GSE19018 | Up | 0.1885489910 |
| GSE19899_A1 | Down | -0.2820779091 |
| GSE19899_A2 | Up | 0.8596687854 |
| PubMed_21979375_A1 | Up | 1.6163889268 |
| PubMed_21979375_A2 | Up | 0.2441142499 |
| GSE35957 | Down | -0.0748379618 |
| GSE36640 | Down | -0.1253640611 |
| GSE54402 | Down | -0.0492431554 |
| GSE9593 | Down | -0.0040331284 |
| GSE43922 | Up | 0.0970945375 |
| GSE24585 | Down | -0.2506037827 |
| GSE37065 | Down | -0.0367535131 |
| GSE28863_A1 | Up | 0.0479864132 |
| GSE28863_A2 | Up | 0.1712838777 |
| GSE28863_A3 | Down | -0.2490312842 |
| GSE28863_A4 | Up | 0.0829541991 |
| GSE48662 | Up | 0.2947136168 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023891 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025884 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025884 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036991 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047323 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
