HCSGD entry for PER3
1. General information
| Official gene symbol | PER3 |
|---|---|
| Entrez ID | 8863 |
| Gene full name | period circadian clock 3 |
| Other gene symbols | GIG13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0004871 | Signal transducer activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007623 | Circadian rhythm | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6816745412 | 0.0555496334 | 0.9999902473 | 0.4437290264 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2784386335 |
| GSE13712_SHEAR | Down | -0.2548957133 |
| GSE13712_STATIC | Down | -0.1728292235 |
| GSE19018 | Up | 0.1168331063 |
| GSE19899_A1 | Up | 0.0062128840 |
| GSE19899_A2 | Down | -0.5613694303 |
| PubMed_21979375_A1 | Down | -0.6615266107 |
| PubMed_21979375_A2 | Down | -0.4622012511 |
| GSE35957 | Down | -0.1207990121 |
| GSE36640 | Up | 0.0864362564 |
| GSE54402 | Down | -0.4193500848 |
| GSE9593 | Up | 0.1297173783 |
| GSE43922 | Down | -1.0184615793 |
| GSE24585 | Up | 0.3723794913 |
| GSE37065 | Down | -0.0004107438 |
| GSE28863_A1 | Up | 0.8283932684 |
| GSE28863_A2 | Up | 0.5123895919 |
| GSE28863_A3 | Down | -0.0521822623 |
| GSE28863_A4 | Down | -0.2762189947 |
| GSE48662 | Down | -0.1571309237 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029909 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030960 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
