HCSGD entry for MTMR1
1. General information
| Official gene symbol | MTMR1 |
|---|---|
| Entrez ID | 8776 |
| Gene full name | myotubularin related protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004438 | Phosphatidylinositol-3-phosphatase activity | IEA ISS | molecular_function |
| GO:0004725 | Protein tyrosine phosphatase activity | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA ISS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005886 | Plasma membrane | IEA ISS | cellular_component |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006661 | Phosphatidylinositol biosynthetic process | TAS | biological_process |
| GO:0016791 | Phosphatase activity | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5607310740 | 0.4123686144 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0633316796 |
| GSE13712_SHEAR | Down | -0.0219147619 |
| GSE13712_STATIC | Up | 0.1259728857 |
| GSE19018 | Up | 0.2677686514 |
| GSE19899_A1 | Down | -0.1441076962 |
| GSE19899_A2 | Up | 0.3242382854 |
| PubMed_21979375_A1 | Up | 0.2236308407 |
| PubMed_21979375_A2 | Down | -0.3780641932 |
| GSE35957 | Up | 0.1099429547 |
| GSE36640 | Down | -0.5331892904 |
| GSE54402 | Up | 0.0515806892 |
| GSE9593 | Up | 0.2055351278 |
| GSE43922 | Up | 0.0039547487 |
| GSE24585 | Up | 0.0299783505 |
| GSE37065 | Down | -0.1633443449 |
| GSE28863_A1 | Down | -0.0690138165 |
| GSE28863_A2 | Up | 0.2939513929 |
| GSE28863_A3 | Down | -0.5183013006 |
| GSE28863_A4 | Down | -0.0887479872 |
| GSE48662 | Up | 0.0378685713 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044287 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
