HCSGD entry for B3GALT4
1. General information
| Official gene symbol | B3GALT4 |
|---|---|
| Entrez ID | 8705 |
| Gene full name | UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 |
| Other gene symbols | BETA3GALT4 GALT2 GALT4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0008499 | UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0047915 | Ganglioside galactosyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4650715284 | 0.6173736370 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1489616091 |
| GSE13712_SHEAR | Down | -0.0915191820 |
| GSE13712_STATIC | Down | -0.2522445582 |
| GSE19018 | Down | -0.0616579717 |
| GSE19899_A1 | Down | -0.1332341849 |
| GSE19899_A2 | Up | 0.0498548669 |
| PubMed_21979375_A1 | Up | 0.1246329059 |
| PubMed_21979375_A2 | Down | -0.0125831435 |
| GSE35957 | Down | -0.0493862613 |
| GSE36640 | Up | 0.0969860178 |
| GSE54402 | Down | -0.1755123556 |
| GSE9593 | Up | 0.0616634888 |
| GSE43922 | Up | 0.0336617613 |
| GSE24585 | Up | 0.2139742640 |
| GSE37065 | Up | 0.2273942319 |
| GSE28863_A1 | Down | -0.0201583383 |
| GSE28863_A2 | Up | 0.0932547640 |
| GSE28863_A3 | Up | 0.2636808891 |
| GSE28863_A4 | Down | -0.0944617428 |
| GSE48662 | Up | 0.8537339313 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | NA | hsa-miR-125b | 18056640 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
