HCSGD entry for VAMP4
1. General information
| Official gene symbol | VAMP4 |
|---|---|
| Entrez ID | 8674 |
| Gene full name | vesicle-associated membrane protein 4 |
| Other gene symbols | VAMP-4 VAMP24 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0000149 | SNARE binding | IBA | molecular_function |
| GO:0005484 | SNAP receptor activity | IBA | molecular_function |
| GO:0005764 | Lysosome | TAS | cellular_component |
| GO:0005768 | Endosome | TAS | cellular_component |
| GO:0005802 | Trans-Golgi network | IEA | cellular_component |
| GO:0006887 | Exocytosis | IBA | biological_process |
| GO:0006897 | Endocytosis | IBA | biological_process |
| GO:0006906 | Vesicle fusion | IBA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031201 | SNARE complex | IBA | cellular_component |
| GO:0042996 | Regulation of Golgi to plasma membrane protein transport | IEA | biological_process |
| GO:0043001 | Golgi to plasma membrane protein transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2556210060 | 0.3763315793 | 0.9477673616 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4028631666 |
| GSE13712_SHEAR | Down | -0.4518097723 |
| GSE13712_STATIC | Down | -0.3518378289 |
| GSE19018 | Up | 0.4172864211 |
| GSE19899_A1 | Up | 0.2019680042 |
| GSE19899_A2 | Up | 0.0841015283 |
| PubMed_21979375_A1 | Down | -0.9569196712 |
| PubMed_21979375_A2 | Up | 0.1537324484 |
| GSE35957 | Down | -0.1627918700 |
| GSE36640 | Up | 0.5046243469 |
| GSE54402 | Up | 0.0610647441 |
| GSE9593 | Up | 0.3542083530 |
| GSE43922 | Down | -0.0298680216 |
| GSE24585 | Up | 0.1966802490 |
| GSE37065 | Down | -0.0273612586 |
| GSE28863_A1 | Down | -0.1357178592 |
| GSE28863_A2 | Up | 0.4994681049 |
| GSE28863_A3 | Down | -0.5365283017 |
| GSE28863_A4 | Down | -0.2122386092 |
| GSE48662 | Down | -0.0029202744 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
