HCSGD entry for USO1
1. General information
| Official gene symbol | USO1 |
|---|---|
| Entrez ID | 8615 |
| Gene full name | USO1 vesicle transport factor |
| Other gene symbols | P115 TAP VDP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0008565 | Protein transporter activity | IEA | molecular_function |
| GO:0045056 | Transcytosis | IEA | biological_process |
| GO:0048280 | Vesicle fusion with Golgi apparatus | IEA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
| GO:0061025 | Membrane fusion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1665859276 | 0.4949440485 | 0.8061607281 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1709078898 |
| GSE13712_SHEAR | Down | -0.3722512101 |
| GSE13712_STATIC | Down | -0.4497714322 |
| GSE19018 | Down | -0.1772964240 |
| GSE19899_A1 | Up | 0.4912805578 |
| GSE19899_A2 | Up | 0.5057486492 |
| PubMed_21979375_A1 | Up | 0.7655244109 |
| PubMed_21979375_A2 | Up | 0.4954779250 |
| GSE35957 | Down | -0.1199797954 |
| GSE36640 | Up | 0.3947816572 |
| GSE54402 | Up | 0.2242828789 |
| GSE9593 | Up | 0.2352082057 |
| GSE43922 | Up | 0.3083032434 |
| GSE24585 | Up | 0.0196926621 |
| GSE37065 | Down | -0.0364772331 |
| GSE28863_A1 | Up | 0.1721440653 |
| GSE28863_A2 | Up | 0.2221566020 |
| GSE28863_A3 | Down | -0.6629208146 |
| GSE28863_A4 | Down | -0.2264459858 |
| GSE48662 | Down | -0.2957921331 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT003825 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017638 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032299 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-421 | MIMAT0003339 | MIRT039355 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
