HCSGD entry for LY6D
1. General information
| Official gene symbol | LY6D |
|---|---|
| Entrez ID | 8581 |
| Gene full name | lymphocyte antigen 6 complex, locus D |
| Other gene symbols | E48 Ly-6D |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0009986 | Cell surface | IEA | cellular_component |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0030098 | Lymphocyte differentiation | IEA | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
| GO:0035634 | Response to stilbenoid | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2220448501 | 0.9369869838 | 0.9034505325 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0282849121 |
| GSE13712_SHEAR | Up | 0.0230638303 |
| GSE13712_STATIC | Up | 0.2169411305 |
| GSE19018 | Down | -0.0007643241 |
| GSE19899_A1 | Up | 0.0039817602 |
| GSE19899_A2 | Up | 0.1188108611 |
| PubMed_21979375_A1 | Down | -0.1246749250 |
| PubMed_21979375_A2 | Down | -0.1925972407 |
| GSE35957 | Up | 0.3751046191 |
| GSE36640 | Down | -0.0097676562 |
| GSE54402 | Down | -0.0870007138 |
| GSE9593 | Up | 0.1810010855 |
| GSE43922 | Up | 0.2072360531 |
| GSE24585 | Up | 0.0565414662 |
| GSE37065 | Up | 0.0473674061 |
| GSE28863_A1 | Up | 0.0235548561 |
| GSE28863_A2 | Up | 0.1208142371 |
| GSE28863_A3 | Up | 0.4852348581 |
| GSE28863_A4 | Up | 0.1799975087 |
| GSE48662 | Up | 0.1180376902 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029345 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
