HCSGD entry for SLC22A16
1. General information
| Official gene symbol | SLC22A16 |
|---|---|
| Entrez ID | 85413 |
| Gene full name | solute carrier family 22 (organic cation/carnitine transporter), member 16 |
| Other gene symbols | CT2 FLIPT2 OAT6 OCT6 OKB1 dJ261K5.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003333 | Amino acid transmembrane transport | IDA | biological_process |
| GO:0005275 | Amine transmembrane transporter activity | IDA | molecular_function |
| GO:0005886 | Plasma membrane | IC TAS | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0007338 | Single fertilization | IMP | biological_process |
| GO:0015101 | Organic cation transmembrane transporter activity | IDA | molecular_function |
| GO:0015226 | Carnitine transmembrane transporter activity | IDA | molecular_function |
| GO:0015695 | Organic cation transport | IDA | biological_process |
| GO:0015837 | Amine transport | IDA | biological_process |
| GO:0015879 | Carnitine transport | IDA | biological_process |
| GO:0016021 | Integral component of membrane | IDA IEA | cellular_component |
| GO:0022857 | Transmembrane transporter activity | IEA | molecular_function |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0030317 | Sperm motility | IMP | biological_process |
| GO:0034220 | Ion transmembrane transport | IDA | biological_process |
| GO:0046717 | Acid secretion | IDA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:0072337 | Modified amino acid transport | IDA | biological_process |
| GO:1902603 | Carnitine transmembrane transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6249406899 | 0.8674599293 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1690830135 |
| GSE13712_SHEAR | Down | -0.0576372288 |
| GSE13712_STATIC | Up | 0.0441742778 |
| GSE19018 | Up | 0.0300958200 |
| GSE19899_A1 | Up | 0.0237815176 |
| GSE19899_A2 | Down | -0.0915845888 |
| PubMed_21979375_A1 | Up | 0.0628990173 |
| PubMed_21979375_A2 | Up | 0.1422797335 |
| GSE35957 | Up | 0.1623299127 |
| GSE36640 | Up | 0.0491520646 |
| GSE54402 | Up | 0.0173548403 |
| GSE9593 | Down | -0.0598429612 |
| GSE43922 | Up | 0.0147271194 |
| GSE24585 | Down | -0.0427433894 |
| GSE37065 | Up | 0.0038749531 |
| GSE28863_A1 | Down | -0.1085756230 |
| GSE28863_A2 | Down | -0.0772052996 |
| GSE28863_A3 | Up | 0.2068967646 |
| GSE28863_A4 | Up | 0.0520836620 |
| GSE48662 | Up | 0.6297783951 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019055 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
