HCSGD entry for AGPS
1. General information
| Official gene symbol | AGPS |
|---|---|
| Entrez ID | 8540 |
| Gene full name | alkylglycerone phosphate synthase |
| Other gene symbols | ADAP-S ADAS ADHAPS ADPS ALDHPSY |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005778 | Peroxisomal membrane | IDA | cellular_component |
| GO:0005782 | Peroxisomal matrix | TAS | cellular_component |
| GO:0008609 | Alkylglycerone-phosphate synthase activity | IDA IEA | molecular_function |
| GO:0008610 | Lipid biosynthetic process | IDA IEA | biological_process |
| GO:0008611 | Ether lipid biosynthetic process | IEA ISS TAS | biological_process |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEA | molecular_function |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0044255 | Cellular lipid metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0050660 | Flavin adenine dinucleotide binding | IEA | molecular_function |
| GO:0071949 | FAD binding | ISS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8448841913 | 0.1103153756 | 0.9999902473 | 0.6361987292 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2411002853 |
| GSE13712_SHEAR | Up | 0.5185244639 |
| GSE13712_STATIC | Up | 0.2740915375 |
| GSE19018 | Down | -0.4470888486 |
| GSE19899_A1 | Up | 0.1580126658 |
| GSE19899_A2 | Down | -0.8252680488 |
| PubMed_21979375_A1 | Down | -0.3151238063 |
| PubMed_21979375_A2 | Down | -0.1373331699 |
| GSE35957 | Down | -0.3285192714 |
| GSE36640 | Down | -0.0930558823 |
| GSE54402 | Down | -0.0388298545 |
| GSE9593 | Down | -0.2594868657 |
| GSE43922 | Down | -0.0099403030 |
| GSE24585 | Up | 0.0478777723 |
| GSE37065 | Up | 0.1493377877 |
| GSE28863_A1 | Up | 0.1264649374 |
| GSE28863_A2 | Up | 0.3737635500 |
| GSE28863_A3 | Down | -0.6417247654 |
| GSE28863_A4 | Down | -0.2263935207 |
| GSE48662 | Down | -0.0645635721 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027666 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
