HCSGD entry for CHST1
1. General information
| Official gene symbol | CHST1 |
|---|---|
| Entrez ID | 8534 |
| Gene full name | carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 |
| Other gene symbols | C6ST GST-1 KS6ST KSGal6ST KSST |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0005976 | Polysaccharide metabolic process | TAS | biological_process |
| GO:0006012 | Galactose metabolic process | IDA | biological_process |
| GO:0006790 | Sulfur compound metabolic process | IDA | biological_process |
| GO:0006954 | Inflammatory response | IEA | biological_process |
| GO:0008146 | Sulfotransferase activity | IDA | molecular_function |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0042339 | Keratan sulfate metabolic process | IDA TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0045130 | Keratan sulfotransferase activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6702675392 | 0.2811187759 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0561893720 |
| GSE13712_SHEAR | Down | -0.6997343977 |
| GSE13712_STATIC | Down | -0.8567047960 |
| GSE19018 | Up | 0.1080515226 |
| GSE19899_A1 | Up | 0.0329313999 |
| GSE19899_A2 | Up | 0.1171068348 |
| PubMed_21979375_A1 | Up | 0.0546039880 |
| PubMed_21979375_A2 | Up | 0.0780527493 |
| GSE35957 | Down | -0.3822891155 |
| GSE36640 | Down | -0.0676912468 |
| GSE54402 | Up | 0.2381102242 |
| GSE9593 | Down | -0.1494492996 |
| GSE43922 | Up | 0.1883579815 |
| GSE24585 | Up | 0.0097557030 |
| GSE37065 | Down | -0.4059343445 |
| GSE28863_A1 | Up | 0.0251637111 |
| GSE28863_A2 | Down | -0.1750600001 |
| GSE28863_A3 | Up | 0.1819804121 |
| GSE28863_A4 | Up | 0.0972433738 |
| GSE48662 | Down | -0.0113604551 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
