HCSGD entry for SLC43A1
1. General information
| Official gene symbol | SLC43A1 |
|---|---|
| Entrez ID | 8501 |
| Gene full name | solute carrier family 43, member 1 |
| Other gene symbols | LAT3 PB39 POV1 R00504 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003333 | Amino acid transmembrane transport | IDA | biological_process |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006865 | Amino acid transport | TAS | biological_process |
| GO:0015175 | Neutral amino acid transmembrane transporter activity | IDA | molecular_function |
| GO:0015179 | L-amino acid transmembrane transporter activity | IEA | molecular_function |
| GO:0015804 | Neutral amino acid transport | IDA | biological_process |
| GO:0034220 | Ion transmembrane transport | IDA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5010032977 | 0.2155119068 | 0.9999902473 | 0.8951825154 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0237845200 |
| GSE13712_SHEAR | Down | -0.7179377993 |
| GSE13712_STATIC | Down | -0.2758240034 |
| GSE19018 | Up | 0.0684983704 |
| GSE19899_A1 | Down | -0.1223971347 |
| GSE19899_A2 | Down | -0.4921020638 |
| PubMed_21979375_A1 | Down | -0.5386723204 |
| PubMed_21979375_A2 | Up | 0.4857793213 |
| GSE35957 | Down | -0.1063928400 |
| GSE36640 | Up | 0.1106490686 |
| GSE54402 | Up | 0.2744382058 |
| GSE9593 | Down | -0.3184879940 |
| GSE43922 | Up | 0.0169230205 |
| GSE24585 | Up | 0.0738323284 |
| GSE37065 | Down | -0.3904059138 |
| GSE28863_A1 | Up | 0.3351823171 |
| GSE28863_A2 | Up | 0.3685183225 |
| GSE28863_A3 | Up | 0.2022566640 |
| GSE28863_A4 | Up | 0.0890980706 |
| GSE48662 | Down | -0.1553412149 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT041721 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046208 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
