HCSGD entry for PPFIA2
1. General information
| Official gene symbol | PPFIA2 |
|---|---|
| Entrez ID | 8499 |
| Gene full name | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007160 | Cell-matrix adhesion | TAS | biological_process |
| GO:0009986 | Cell surface | IEA | cellular_component |
| GO:0045202 | Synapse | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7233636450 | 0.6325508643 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0872739593 |
| GSE13712_SHEAR | Up | 0.0726247437 |
| GSE13712_STATIC | Up | 0.0307861869 |
| GSE19018 | Up | 0.1121619296 |
| GSE19899_A1 | Up | 0.0248874204 |
| GSE19899_A2 | Up | 0.1903429535 |
| PubMed_21979375_A1 | Up | 0.1928008925 |
| PubMed_21979375_A2 | Down | -0.0085589391 |
| GSE35957 | Up | 0.0619649382 |
| GSE36640 | Down | -0.0565510775 |
| GSE54402 | Down | -0.1856432125 |
| GSE9593 | Down | -0.2683609588 |
| GSE43922 | Up | 0.0118351636 |
| GSE24585 | Up | 0.3047228050 |
| GSE37065 | Down | -0.0560465410 |
| GSE28863_A1 | Down | -0.2063085976 |
| GSE28863_A2 | Down | -0.1418804222 |
| GSE28863_A3 | Up | 0.1934493095 |
| GSE28863_A4 | Up | 0.0084790833 |
| GSE48662 | Down | -0.1216798369 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018789 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
