HCSGD entry for RANBP3
1. General information
| Official gene symbol | RANBP3 |
|---|---|
| Entrez ID | 8498 |
| Gene full name | RAN binding protein 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0008536 | Ran GTPase binding | TAS | molecular_function |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0046907 | Intracellular transport | IEA | biological_process |
| GO:0070412 | R-SMAD binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7128573117 | 0.7674212644 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0131266850 |
| GSE13712_SHEAR | Down | -0.0173439941 |
| GSE13712_STATIC | Up | 0.0708518181 |
| GSE19018 | Down | -0.1541934989 |
| GSE19899_A1 | Down | -0.1328697015 |
| GSE19899_A2 | Up | 0.2607391423 |
| PubMed_21979375_A1 | Up | 0.5080036077 |
| PubMed_21979375_A2 | Up | 0.1299622170 |
| GSE35957 | Down | -0.0354733064 |
| GSE36640 | Down | -0.1703980528 |
| GSE54402 | Up | 0.0687238879 |
| GSE9593 | Up | 0.1220638618 |
| GSE43922 | Down | -0.0178009201 |
| GSE24585 | Down | -0.1138204078 |
| GSE37065 | Down | -0.0911779898 |
| GSE28863_A1 | Up | 0.1528967257 |
| GSE28863_A2 | Up | 0.0986878399 |
| GSE28863_A3 | Up | 0.0703706297 |
| GSE28863_A4 | Up | 0.0434683115 |
| GSE48662 | Down | -0.0239598122 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT004172 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037884 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
