HCSGD entry for TNS4
1. General information
| Official gene symbol | TNS4 |
|---|---|
| Entrez ID | 84951 |
| Gene full name | tensin 4 |
| Other gene symbols | CTEN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005925 | Focal adhesion | IDA | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0008104 | Protein localization | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6045001482 | 0.7522055127 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0202498384 |
| GSE13712_SHEAR | Up | 0.1329924733 |
| GSE13712_STATIC | Down | -0.1441073548 |
| GSE19018 | Down | -0.0801244759 |
| GSE19899_A1 | Up | 0.1284009101 |
| GSE19899_A2 | Up | 0.1920648927 |
| PubMed_21979375_A1 | Down | -0.1513411578 |
| PubMed_21979375_A2 | Up | 0.0165334682 |
| GSE35957 | Down | -0.0378761033 |
| GSE36640 | Down | -0.1746177180 |
| GSE54402 | Down | -0.0009858669 |
| GSE9593 | Down | -0.0202587651 |
| GSE43922 | Up | 0.0748381201 |
| GSE24585 | Up | 0.1286914273 |
| GSE37065 | Up | 0.2549848542 |
| GSE28863_A1 | Down | -0.2482970959 |
| GSE28863_A2 | Down | -0.1234026297 |
| GSE28863_A3 | Up | 0.2718415345 |
| GSE28863_A4 | Up | 0.0591940938 |
| GSE48662 | Up | 0.1555556905 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT003769 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018760 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023010 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030073 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
