HCSGD entry for TMTC4
1. General information
| Official gene symbol | TMTC4 |
|---|---|
| Entrez ID | 84899 |
| Gene full name | transmembrane and tetratricopeptide repeat containing 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9771003077 | 0.0171468143 | 0.9999902473 | 0.2568704041 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0035267345 |
| GSE13712_SHEAR | Down | -0.2037689337 |
| GSE13712_STATIC | Down | -0.2263666495 |
| GSE19018 | Down | -0.1432195489 |
| GSE19899_A1 | Down | -0.3213518454 |
| GSE19899_A2 | Down | -0.9145529729 |
| PubMed_21979375_A1 | Down | -0.5599145251 |
| PubMed_21979375_A2 | Down | -0.4412317382 |
| GSE35957 | Down | -0.7173793831 |
| GSE36640 | Down | -1.0016777873 |
| GSE54402 | Up | 0.1560101431 |
| GSE9593 | Down | -0.6100328830 |
| GSE43922 | Down | -0.4048872504 |
| GSE24585 | Down | -0.2982414392 |
| GSE37065 | Up | 0.0051955377 |
| GSE28863_A1 | Up | 0.1723151718 |
| GSE28863_A2 | Up | 0.1576245786 |
| GSE28863_A3 | Up | 0.1620240141 |
| GSE28863_A4 | Down | -0.0050308135 |
| GSE48662 | Down | -0.5994298553 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019834 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024893 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026558 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030539 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050943 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
