HCSGD entry for LRCH3
1. General information
| Official gene symbol | LRCH3 |
|---|---|
| Entrez ID | 84859 |
| Gene full name | leucine-rich repeats and calponin homology (CH) domain containing 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8620708256 | 0.2141900840 | 0.9999902473 | 0.8935424723 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0806040763 |
| GSE13712_SHEAR | Up | 0.1264787660 |
| GSE13712_STATIC | Up | 0.0197443911 |
| GSE19018 | Down | -0.0828021997 |
| GSE19899_A1 | Down | -0.1120769541 |
| GSE19899_A2 | Down | -0.3493884924 |
| PubMed_21979375_A1 | Down | -0.5038450905 |
| PubMed_21979375_A2 | Down | -0.3223859166 |
| GSE35957 | Up | 0.0543204554 |
| GSE36640 | Down | -0.1895893638 |
| GSE54402 | Up | 0.1174971659 |
| GSE9593 | Up | 0.0571471458 |
| GSE43922 | Down | -0.1634799418 |
| GSE24585 | Up | 0.3961317546 |
| GSE37065 | Up | 0.0399224369 |
| GSE28863_A1 | Up | 0.3409491401 |
| GSE28863_A2 | Up | 0.2126429983 |
| GSE28863_A3 | Down | -0.4685886355 |
| GSE28863_A4 | Down | -0.2609147000 |
| GSE48662 | Down | -0.0573725488 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320a | MIMAT0000510 | MIRT044498 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
