HCSGD entry for USP30
1. General information
| Official gene symbol | USP30 |
|---|---|
| Entrez ID | 84749 |
| Gene full name | ubiquitin specific peptidase 30 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004221 | Ubiquitin thiolesterase activity | IEA | molecular_function |
| GO:0005741 | Mitochondrial outer membrane | IEA | cellular_component |
| GO:0006511 | Ubiquitin-dependent protein catabolic process | IEA | biological_process |
| GO:0008234 | Cysteine-type peptidase activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1959009992 | 0.6463629231 | 0.8576219638 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1729783793 |
| GSE13712_SHEAR | Down | -0.3150180394 |
| GSE13712_STATIC | Up | 0.0940925331 |
| GSE19018 | Up | 0.0555904460 |
| GSE19899_A1 | Down | -0.0710753871 |
| GSE19899_A2 | Up | 0.5218047614 |
| PubMed_21979375_A1 | Up | 0.2351864127 |
| PubMed_21979375_A2 | Up | 0.8995246051 |
| GSE35957 | Up | 0.1994716711 |
| GSE36640 | Up | 0.6896989755 |
| GSE54402 | Down | -0.3368026576 |
| GSE9593 | Up | 0.3407430158 |
| GSE43922 | Down | -0.0129878842 |
| GSE24585 | Up | 0.4536798315 |
| GSE37065 | Up | 0.0263880594 |
| GSE28863_A1 | Down | -0.1165322000 |
| GSE28863_A2 | Down | -0.0881904225 |
| GSE28863_A3 | Down | -0.4605900994 |
| GSE28863_A4 | Down | -0.1232444261 |
| GSE48662 | Down | -0.0240720141 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-5p | MIMAT0004949 | MIRT037261 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042215 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
