HCSGD entry for PRRC2B
1. General information
| Official gene symbol | PRRC2B |
|---|---|
| Entrez ID | 84726 |
| Gene full name | proline-rich coiled-coil 2B |
| Other gene symbols | BAT2L BAT2L1 KIAA0515 LQFBS-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1742678660 | 0.6600975077 | 0.8196438549 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2289886326 |
| GSE13712_SHEAR | Up | 0.0228075624 |
| GSE13712_STATIC | Down | -0.0372953579 |
| GSE19018 | Up | 0.1838652444 |
| GSE19899_A1 | Down | -0.0395493429 |
| GSE19899_A2 | Up | 0.1617700085 |
| PubMed_21979375_A1 | Down | -0.8837749659 |
| PubMed_21979375_A2 | Up | 0.5858755229 |
| GSE35957 | Down | -0.0042113805 |
| GSE36640 | Up | 0.1679257580 |
| GSE54402 | Down | -0.1119054051 |
| GSE9593 | Down | -0.0146853127 |
| GSE43922 | Down | -0.0287397969 |
| GSE24585 | Up | 0.5516856882 |
| GSE37065 | Down | -0.1723790193 |
| GSE28863_A1 | Up | 0.7575820341 |
| GSE28863_A2 | Up | 0.3305723776 |
| GSE28863_A3 | Up | 0.0407512264 |
| GSE28863_A4 | Down | -0.0784700902 |
| GSE48662 | Up | 0.3378415245 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1910-5p | MIMAT0007884 | MIRT035799 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1284 | MIMAT0005941 | MIRT035831 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037069 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038399 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040120 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040543 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT041046 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041323 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042214 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042913 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043318 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047334 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT047344 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048963 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052029 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
