HCSGD entry for SRRM4
1. General information
| Official gene symbol | SRRM4 |
|---|---|
| Entrez ID | 84530 |
| Gene full name | serine/arginine repetitive matrix 4 |
| Other gene symbols | KIAA1853 MU-MB-2.76 nSR100 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000381 | Regulation of alternative mRNA splicing, via spliceosome | IEA | biological_process |
| GO:0003729 | MRNA binding | ISS | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0006397 | MRNA processing | ISS | biological_process |
| GO:0007399 | Nervous system development | ISS | biological_process |
| GO:0007605 | Sensory perception of sound | IEA | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
| GO:0030154 | Cell differentiation | ISS | biological_process |
| GO:0043484 | Regulation of RNA splicing | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5513768854 | 0.9382450021 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0897947104 |
| GSE13712_SHEAR | Up | 0.0553605420 |
| GSE13712_STATIC | Up | 0.0724067904 |
| GSE19018 | Up | 0.0561279886 |
| GSE19899_A1 | Up | 0.1017838063 |
| GSE19899_A2 | Up | 0.1376116576 |
| PubMed_21979375_A1 | Up | 0.0606250708 |
| PubMed_21979375_A2 | Down | -0.0020024226 |
| GSE35957 | Up | 0.1046066297 |
| GSE36640 | Down | -0.0667460033 |
| GSE54402 | Up | 0.0402566955 |
| GSE9593 | Up | 0.0086932284 |
| GSE43922 | Up | 0.0224276208 |
| GSE24585 | Up | 0.1645761720 |
| GSE37065 | Down | -0.0181002249 |
| GSE28863_A1 | Up | 0.0696339860 |
| GSE28863_A2 | Up | 0.0819915138 |
| GSE28863_A3 | Up | 0.3811908510 |
| GSE28863_A4 | Up | 0.0219151029 |
| GSE48662 | Down | -0.0490653680 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
