HCSGD entry for JPH4
1. General information
| Official gene symbol | JPH4 |
|---|---|
| Entrez ID | 84502 |
| Gene full name | junctophilin 4 |
| Other gene symbols | JP4 JPHL1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005790 | Smooth endoplasmic reticulum | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007612 | Learning | IEA | biological_process |
| GO:0014701 | Junctional sarcoplasmic reticulum membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043198 | Dendritic shaft | IEA | cellular_component |
| GO:0048167 | Regulation of synaptic plasticity | IEA | biological_process |
| GO:0050885 | Neuromuscular process controlling balance | IEA | biological_process |
| GO:0060314 | Regulation of ryanodine-sensitive calcium-release channel activity | TAS | biological_process |
| GO:0060402 | Calcium ion transport into cytosol | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8367299723 | 0.8864604992 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | - | - |
| GSE13712_SHEAR | - | - |
| GSE13712_STATIC | - | - |
| GSE19018 | - | - |
| GSE19899_A1 | - | - |
| GSE19899_A2 | - | - |
| PubMed_21979375_A1 | - | - |
| PubMed_21979375_A2 | - | - |
| GSE35957 | - | - |
| GSE36640 | - | - |
| GSE54402 | - | - |
| GSE9593 | - | - |
| GSE43922 | Up | 0.1088681171 |
| GSE24585 | Up | 0.0587722213 |
| GSE37065 | Down | -0.0771204947 |
| GSE28863_A1 | Down | -0.1086653557 |
| GSE28863_A2 | Down | -0.0443771633 |
| GSE28863_A3 | Up | 0.2964616892 |
| GSE28863_A4 | Up | 0.0302989547 |
| GSE48662 | Down | -0.0193187558 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7a-5p | MIMAT0000062 | MIRT052517 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
