HCSGD entry for TMEM107
1. General information
| Official gene symbol | TMEM107 |
|---|---|
| Entrez ID | 84314 |
| Gene full name | transmembrane protein 107 |
| Other gene symbols | GRVS638 PRO1268 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0021532 | Neural tube patterning | IEA | biological_process |
| GO:0042384 | Cilium assembly | ISS | biological_process |
| GO:0042733 | Embryonic digit morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1922722731 | 0.3320582957 | 0.8506446405 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0544469883 |
| GSE13712_SHEAR | Down | -0.5580992938 |
| GSE13712_STATIC | Down | -0.3346188852 |
| GSE19018 | Up | 0.5697392430 |
| GSE19899_A1 | Up | 0.2543797116 |
| GSE19899_A2 | Up | 0.0437864818 |
| PubMed_21979375_A1 | Down | -0.4387652524 |
| PubMed_21979375_A2 | Down | -0.2891581566 |
| GSE35957 | Down | -0.4535318572 |
| GSE36640 | Up | 0.8075618316 |
| GSE54402 | Up | 0.1763279305 |
| GSE9593 | Down | -0.0334424670 |
| GSE43922 | Up | 0.0028627077 |
| GSE24585 | Up | 0.4901173463 |
| GSE37065 | Down | -0.0384316048 |
| GSE28863_A1 | Down | -0.2006059109 |
| GSE28863_A2 | Down | -0.1844182450 |
| GSE28863_A3 | Down | -0.2752563607 |
| GSE28863_A4 | Up | 0.1210916159 |
| GSE48662 | Up | 0.7321904008 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-652-3p | MIMAT0003322 | MIRT039501 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051417 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
