HCSGD entry for NICN1
1. General information
| Official gene symbol | NICN1 |
|---|---|
| Entrez ID | 84276 |
| Gene full name | nicolin 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9754750579 | 0.0109754607 | 0.9999902473 | 0.2072346485 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2141378867 |
| GSE13712_SHEAR | Down | -0.9975060375 |
| GSE13712_STATIC | Down | -0.3577933060 |
| GSE19018 | Down | -0.4028840664 |
| GSE19899_A1 | Down | -0.3919597406 |
| GSE19899_A2 | Down | -0.3007028106 |
| PubMed_21979375_A1 | Down | -1.5971202705 |
| PubMed_21979375_A2 | Down | -0.7906646494 |
| GSE35957 | Down | -0.1883593673 |
| GSE36640 | Up | 0.5571068959 |
| GSE54402 | Down | -0.6290722420 |
| GSE9593 | Down | -0.3856102041 |
| GSE43922 | Down | -0.2093752839 |
| GSE24585 | Up | 0.4301190059 |
| GSE37065 | Down | -0.1291647572 |
| GSE28863_A1 | Up | 0.0480933398 |
| GSE28863_A2 | Down | -0.0960546047 |
| GSE28863_A3 | Down | -0.3178005582 |
| GSE28863_A4 | Down | -0.1284848084 |
| GSE48662 | Up | 0.2216914130 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7e-5p | MIMAT0000066 | MIRT051677 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
