HCSGD entry for POLDIP3
1. General information
| Official gene symbol | POLDIP3 |
|---|---|
| Entrez ID | 84271 |
| Gene full name | polymerase (DNA-directed), delta interacting protein 3 |
| Other gene symbols | PDIP46 SKAR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0000346 | Transcription export complex | IDA | cellular_component |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0016607 | Nuclear speck | IDA | cellular_component |
| GO:0016973 | Poly(A)+ mRNA export from nucleus | IDA | biological_process |
| GO:0035145 | Exon-exon junction complex | IDA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0045727 | Positive regulation of translation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2295157137 | 0.9113217545 | 0.9123581459 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0455176117 |
| GSE13712_SHEAR | Up | 0.0723473637 |
| GSE13712_STATIC | Up | 0.1286531046 |
| GSE19018 | Down | -0.0200264914 |
| GSE19899_A1 | Up | 0.1977626782 |
| GSE19899_A2 | Up | 0.2281569699 |
| PubMed_21979375_A1 | Up | 0.1943760609 |
| PubMed_21979375_A2 | Up | 0.2947624990 |
| GSE35957 | Down | -0.1180683751 |
| GSE36640 | Down | -0.0395085419 |
| GSE54402 | Up | 0.1149948361 |
| GSE9593 | Up | 0.0614831243 |
| GSE43922 | Up | 0.3737876652 |
| GSE24585 | Up | 0.1332310325 |
| GSE37065 | Down | -0.0458735635 |
| GSE28863_A1 | Up | 0.3624333751 |
| GSE28863_A2 | Up | 0.1248375119 |
| GSE28863_A3 | Down | -0.4623422630 |
| GSE28863_A4 | Down | -0.1137902541 |
| GSE48662 | Up | 0.1182540428 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042381 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043499 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30e-5p | MIMAT0000692 | MIRT044150 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
