HCSGD entry for GARNL3
1. General information
| Official gene symbol | GARNL3 |
|---|---|
| Entrez ID | 84253 |
| Gene full name | GTPase activating Rap/RanGAP domain-like 3 |
| Other gene symbols | bA356B19.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005083 | Small GTPase regulator activity | IEA | molecular_function |
| GO:0005096 | GTPase activator activity | IEA | molecular_function |
| GO:0051056 | Regulation of small GTPase mediated signal transduction | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8832710269 | 0.4743884313 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0582052560 |
| GSE13712_SHEAR | Down | -0.0519624725 |
| GSE13712_STATIC | Down | -0.0244733230 |
| GSE19018 | Down | -0.0090522080 |
| GSE19899_A1 | Up | 0.0272209965 |
| GSE19899_A2 | Down | -0.0032616465 |
| PubMed_21979375_A1 | Down | -0.2729838276 |
| PubMed_21979375_A2 | Down | -0.1835171399 |
| GSE35957 | Down | -0.0901255419 |
| GSE36640 | Up | 0.1185522078 |
| GSE54402 | Down | -0.0654310177 |
| GSE9593 | Up | 0.0831464162 |
| GSE43922 | Down | -0.2831855720 |
| GSE24585 | Down | -0.4069709878 |
| GSE37065 | Up | 0.0152502797 |
| GSE28863_A1 | Up | 0.0705196932 |
| GSE28863_A2 | Up | 0.4007279984 |
| GSE28863_A3 | Up | 0.1894281933 |
| GSE28863_A4 | Up | 0.0536081211 |
| GSE48662 | Up | 0.0375211178 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048979 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
