HCSGD entry for ZNF644
1. General information
| Official gene symbol | ZNF644 |
|---|---|
| Entrez ID | 84146 |
| Gene full name | zinc finger protein 644 |
| Other gene symbols | BM-005 MYP21 NatF ZEP-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4961209225 | 0.1872311234 | 0.9999902473 | 0.8388273021 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1698727862 |
| GSE13712_SHEAR | Up | 0.1703218358 |
| GSE13712_STATIC | Up | 0.1422450133 |
| GSE19018 | Down | -0.4780890075 |
| GSE19899_A1 | Up | 0.0856899752 |
| GSE19899_A2 | Down | -0.2659796997 |
| PubMed_21979375_A1 | Up | 0.8863860532 |
| PubMed_21979375_A2 | Up | 0.0519481909 |
| GSE35957 | Down | -0.1373196926 |
| GSE36640 | Down | -0.7014813684 |
| GSE54402 | Up | 0.1957026681 |
| GSE9593 | Down | -0.2980180627 |
| GSE43922 | Up | 0.0458450249 |
| GSE24585 | Up | 0.3642365723 |
| GSE37065 | Up | 0.1754313085 |
| GSE28863_A1 | Up | 0.1977428051 |
| GSE28863_A2 | Up | 0.2630421688 |
| GSE28863_A3 | Down | -0.8240441974 |
| GSE28863_A4 | Down | -0.3146062444 |
| GSE48662 | Down | -0.1351350699 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025378 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031171 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032169 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051132 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052493 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
