HCSGD entry for GPR98
1. General information
| Official gene symbol | GPR98 |
|---|---|
| Entrez ID | 84059 |
| Gene full name | G protein-coupled receptor 98 |
| Other gene symbols | FEB4 MASS1 USH2B USH2C VLGR1 VLGR1b |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002142 | Stereocilia ankle link complex | IEA | cellular_component |
| GO:0004930 | G-protein coupled receptor activity | IEA NAS | molecular_function |
| GO:0005509 | Calcium ion binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007186 | G-protein coupled receptor signaling pathway | TAS | biological_process |
| GO:0007218 | Neuropeptide signaling pathway | IEA | biological_process |
| GO:0007399 | Nervous system development | NAS | biological_process |
| GO:0007601 | Visual perception | IEA | biological_process |
| GO:0007605 | Sensory perception of sound | IMP | biological_process |
| GO:0009986 | Cell surface | IDA | cellular_component |
| GO:0016020 | Membrane | NAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016337 | Cell-cell adhesion | NAS | biological_process |
| GO:0017022 | Myosin binding | IEA | molecular_function |
| GO:0043235 | Receptor complex | IDA | cellular_component |
| GO:0045494 | Photoreceptor cell maintenance | IMP | biological_process |
| GO:0048496 | Maintenance of organ identity | IMP | biological_process |
| GO:0050877 | Neurological system process | IMP | biological_process |
| GO:0050910 | Detection of mechanical stimulus involved in sensory perception of sound | IEA | biological_process |
| GO:0050953 | Sensory perception of light stimulus | IMP | biological_process |
| GO:0060122 | Inner ear receptor stereocilium organization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6378987652 | 0.9403739638 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0290678420 |
| GSE13712_SHEAR | Down | -0.0219961109 |
| GSE13712_STATIC | Down | -0.1069055326 |
| GSE19018 | Up | 0.0969428226 |
| GSE19899_A1 | Up | 0.0435915747 |
| GSE19899_A2 | Down | -0.0267097663 |
| PubMed_21979375_A1 | Up | 0.0307101753 |
| PubMed_21979375_A2 | Up | 0.0937842978 |
| GSE35957 | Up | 0.0913992462 |
| GSE36640 | Up | 0.0703006439 |
| GSE54402 | Up | 0.0969288759 |
| GSE9593 | Up | 0.0631799682 |
| GSE43922 | Up | 0.0118004408 |
| GSE24585 | Up | 0.3077035339 |
| GSE37065 | Up | 0.0077959948 |
| GSE28863_A1 | Down | -0.0295404266 |
| GSE28863_A2 | Up | 0.0522767398 |
| GSE28863_A3 | Up | 0.1062155551 |
| GSE28863_A4 | Down | -0.0081663101 |
| GSE48662 | Up | 0.0807725779 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-296-3p | MIMAT0004679 | MIRT038437 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047581 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
