HCSGD entry for KCTD10
1. General information
| Official gene symbol | KCTD10 |
|---|---|
| Entrez ID | 83892 |
| Gene full name | potassium channel tetramerisation domain containing 10 |
| Other gene symbols | BTBD28 ULRO61 hBACURD3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | ISS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0016567 | Protein ubiquitination | ISS | biological_process |
| GO:0031463 | Cul3-RING ubiquitin ligase complex | ISS | cellular_component |
| GO:0036038 | TCTN-B9D complex | IEA | cellular_component |
| GO:0043161 | Proteasome-mediated ubiquitin-dependent protein catabolic process | ISS | biological_process |
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1985660499 | 0.5683332434 | 0.8609345356 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1782144305 |
| GSE13712_SHEAR | Down | -0.0733440237 |
| GSE13712_STATIC | Down | -0.1740313914 |
| GSE19018 | Down | -0.2402007381 |
| GSE19899_A1 | Down | -0.3565786834 |
| GSE19899_A2 | Up | 0.3062098386 |
| PubMed_21979375_A1 | Up | 0.0094880359 |
| PubMed_21979375_A2 | Up | 0.4702874259 |
| GSE35957 | Up | 0.4199901748 |
| GSE36640 | Up | 0.1287805691 |
| GSE54402 | Up | 0.5549726486 |
| GSE9593 | Up | 0.5072174565 |
| GSE43922 | Down | -0.0337976928 |
| GSE24585 | Up | 0.1001015000 |
| GSE37065 | Down | -0.3126333835 |
| GSE28863_A1 | Up | 0.7166672086 |
| GSE28863_A2 | Up | 0.2508244319 |
| GSE28863_A3 | Down | -0.0366105326 |
| GSE28863_A4 | Up | 0.0145204352 |
| GSE48662 | Down | -0.1408078998 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019854 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020169 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031145 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041231 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
