HCSGD entry for SNX25
1. General information
| Official gene symbol | SNX25 |
|---|---|
| Entrez ID | 83891 |
| Gene full name | sorting nexin 25 |
| Other gene symbols | SBBI31 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
| GO:0038032 | Termination of G-protein coupled receptor signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5809310702 | 0.2848129060 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2257835850 |
| GSE13712_SHEAR | Down | -0.5272794243 |
| GSE13712_STATIC | Down | -0.1825742446 |
| GSE19018 | Up | 0.2858144576 |
| GSE19899_A1 | Up | 0.1737802691 |
| GSE19899_A2 | Down | -0.0105280793 |
| PubMed_21979375_A1 | Down | -0.3194785822 |
| PubMed_21979375_A2 | Up | 0.0235253616 |
| GSE35957 | Up | 0.1908244377 |
| GSE36640 | Up | 0.0348186415 |
| GSE54402 | Up | 0.3986942586 |
| GSE9593 | Up | 0.2483092941 |
| GSE43922 | Up | 0.0263714169 |
| GSE24585 | Up | 0.0432066897 |
| GSE37065 | Down | -0.1830851034 |
| GSE28863_A1 | Down | -0.1618480250 |
| GSE28863_A2 | Up | 0.0349814578 |
| GSE28863_A3 | Down | -0.1461480906 |
| GSE28863_A4 | Down | -0.0509774473 |
| GSE48662 | Down | -0.3931265798 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019745 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
