HCSGD entry for SPATA9
1. General information
| Official gene symbol | SPATA9 |
|---|---|
| Entrez ID | 83890 |
| Gene full name | spermatogenesis associated 9 |
| Other gene symbols | NYD-SP16 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9400902017 | 0.2723830933 | 0.9999902473 | 0.9986145404 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0866731950 |
| GSE13712_SHEAR | Up | 0.0584765414 |
| GSE13712_STATIC | Up | 0.0422020171 |
| GSE19018 | Down | -0.1059766186 |
| GSE19899_A1 | Up | 0.0914170648 |
| GSE19899_A2 | Down | -0.5210364664 |
| PubMed_21979375_A1 | Down | -0.2102199613 |
| PubMed_21979375_A2 | Down | -0.2843860063 |
| GSE35957 | Up | 0.0872089270 |
| GSE36640 | Up | 0.2519828721 |
| GSE54402 | Down | -0.1244182393 |
| GSE9593 | Down | -0.0121950031 |
| GSE43922 | Down | -0.0034127687 |
| GSE24585 | Down | -0.2184504225 |
| GSE37065 | Down | -0.0093791904 |
| GSE28863_A1 | Down | -0.1242501165 |
| GSE28863_A2 | Down | -0.2530314595 |
| GSE28863_A3 | Up | 0.0302642251 |
| GSE28863_A4 | Down | -0.0662783626 |
| GSE48662 | Down | -0.0441432385 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017900 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022601 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
