HCSGD entry for ROPN1L
1. General information
| Official gene symbol | ROPN1L |
|---|---|
| Entrez ID | 83853 |
| Gene full name | rhophilin associated tail protein 1-like |
| Other gene symbols | ASP RSPH11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001539 | Ciliary or bacterial-type flagellar motility | IDA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0031514 | Motile cilium | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0389160670 | 0.9359683523 | 0.4446473319 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0060805611 |
| GSE13712_SHEAR | Down | -0.1787360297 |
| GSE13712_STATIC | Down | -0.0835095916 |
| GSE19018 | Down | -0.0539380891 |
| GSE19899_A1 | Up | 0.0050265236 |
| GSE19899_A2 | Up | 0.4562124100 |
| PubMed_21979375_A1 | Down | -0.1333671133 |
| PubMed_21979375_A2 | Up | 0.3131696881 |
| GSE35957 | Up | 0.1754837286 |
| GSE36640 | Down | -0.0784773771 |
| GSE54402 | Up | 0.2465726085 |
| GSE9593 | Up | 0.1620719079 |
| GSE43922 | Up | 0.8953000146 |
| GSE24585 | Up | 1.1557970282 |
| GSE37065 | Up | 0.1419865034 |
| GSE28863_A1 | Up | 0.0036906924 |
| GSE28863_A2 | Down | -0.0146572823 |
| GSE28863_A3 | Up | 0.3398996132 |
| GSE28863_A4 | Down | -0.3210583319 |
| GSE48662 | Up | 1.0704713027 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019427 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022026 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024745 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025138 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026855 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
