HCSGD entry for TRAPPC9
1. General information
| Official gene symbol | TRAPPC9 |
|---|---|
| Entrez ID | 83696 |
| Gene full name | trafficking protein particle complex 9 |
| Other gene symbols | IBP IKBKBBP MRT13 NIBP TRS120 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8532551955 | 0.2822175905 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1412653520 |
| GSE13712_SHEAR | Down | -0.5218693714 |
| GSE13712_STATIC | Down | -0.3214058314 |
| GSE19018 | Up | 0.2517847972 |
| GSE19899_A1 | Down | -0.0164260100 |
| GSE19899_A2 | Down | -0.0131124188 |
| PubMed_21979375_A1 | Down | -0.1294679175 |
| PubMed_21979375_A2 | Down | -0.2361756152 |
| GSE35957 | Up | 0.0433395787 |
| GSE36640 | Up | 0.0500726117 |
| GSE54402 | Down | -0.1108401397 |
| GSE9593 | Up | 0.0078444459 |
| GSE43922 | Down | -0.8947263895 |
| GSE24585 | Up | 0.1928162948 |
| GSE37065 | Down | -0.0986173189 |
| GSE28863_A1 | Up | 0.2278916740 |
| GSE28863_A2 | Up | 0.2450001442 |
| GSE28863_A3 | Up | 0.0196209720 |
| GSE28863_A4 | Up | 0.0235598302 |
| GSE48662 | Up | 0.1493699392 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30e-5p | MIMAT0000692 | MIRT044131 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048179 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
