HCSGD entry for TMUB1
1. General information
| Official gene symbol | TMUB1 |
|---|---|
| Entrez ID | 83590 |
| Gene full name | transmembrane and ubiquitin-like domain containing 1 |
| Other gene symbols | C7orf21 DULP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8363429163 | 0.0781993541 | 0.9999902473 | 0.5289861732 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0567040568 |
| GSE13712_SHEAR | Up | 0.1218480742 |
| GSE13712_STATIC | Up | 0.0415817742 |
| GSE19018 | Up | 0.0823766875 |
| GSE19899_A1 | Down | -0.3635645957 |
| GSE19899_A2 | Up | 0.4771180408 |
| PubMed_21979375_A1 | Down | -0.5064316487 |
| PubMed_21979375_A2 | Up | 0.6417601345 |
| GSE35957 | Down | -0.1784179512 |
| GSE36640 | Down | -0.0873271360 |
| GSE54402 | Down | -0.0843514895 |
| GSE9593 | Down | -0.5560130703 |
| GSE43922 | Up | 0.0466190334 |
| GSE24585 | Up | 0.0530577092 |
| GSE37065 | Down | -0.1313664007 |
| GSE28863_A1 | Down | -0.4676240958 |
| GSE28863_A2 | Down | -0.1081587880 |
| GSE28863_A3 | Down | -0.2102570891 |
| GSE28863_A4 | Down | -0.2236523186 |
| GSE48662 | Down | -0.2361759496 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1250-5p | MIMAT0005902 | MIRT035865 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038072 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039677 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046628 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049837 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050340 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
