HCSGD entry for COG3
1. General information
| Official gene symbol | COG3 |
|---|---|
| Entrez ID | 83548 |
| Gene full name | component of oligomeric golgi complex 3 |
| Other gene symbols | SEC34 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005801 | Cis-Golgi network | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006486 | Protein glycosylation | IMP | biological_process |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006888 | ER to Golgi vesicle-mediated transport | IDA | biological_process |
| GO:0006890 | Retrograde vesicle-mediated transport, Golgi to ER | IMP | biological_process |
| GO:0006891 | Intra-Golgi vesicle-mediated transport | IDA | biological_process |
| GO:0008565 | Protein transporter activity | IDA | molecular_function |
| GO:0017119 | Golgi transport complex | IDA | cellular_component |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0033365 | Protein localization to organelle | IMP | biological_process |
| GO:0050821 | Protein stabilization | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1530309905 | 0.8076240720 | 0.7799638942 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3724941811 |
| GSE13712_SHEAR | Up | 0.1810666149 |
| GSE13712_STATIC | Up | 0.3420067417 |
| GSE19018 | Down | -0.0794804623 |
| GSE19899_A1 | Up | 0.0331609635 |
| GSE19899_A2 | Up | 0.1518745931 |
| PubMed_21979375_A1 | Down | -0.0745741423 |
| PubMed_21979375_A2 | Up | 0.1353642355 |
| GSE35957 | Up | 0.0028222572 |
| GSE36640 | Up | 0.2400261952 |
| GSE54402 | Up | 0.1735644245 |
| GSE9593 | Up | 0.2873166914 |
| GSE43922 | Up | 0.1119998757 |
| GSE24585 | Up | 0.2442829153 |
| GSE37065 | Up | 0.0377352033 |
| GSE28863_A1 | Up | 0.1270480456 |
| GSE28863_A2 | Up | 0.0490061428 |
| GSE28863_A3 | Down | -0.8548839087 |
| GSE28863_A4 | Up | 0.0994329811 |
| GSE48662 | Down | -0.2727673706 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017229 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
