HCSGD entry for HIST1H2BO
1. General information
| Official gene symbol | HIST1H2BO |
|---|---|
| Entrez ID | 8348 |
| Gene full name | histone cluster 1, H2bo |
| Other gene symbols | H2B.2 H2B/n H2BFN dJ193B12.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | NAS | cellular_component |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | NAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7095347935 | 0.1295974811 | 0.9999902473 | 0.6930923202 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0601205370 |
| GSE13712_SHEAR | Up | 0.2358143025 |
| GSE13712_STATIC | Up | 0.0737502718 |
| GSE19018 | Up | 0.1530159921 |
| GSE19899_A1 | Up | 0.1875618505 |
| GSE19899_A2 | Up | 0.1878065743 |
| PubMed_21979375_A1 | Down | -0.4807780492 |
| PubMed_21979375_A2 | Up | 0.0583712251 |
| GSE35957 | Up | 0.1241733045 |
| GSE36640 | Down | -1.1982526850 |
| GSE54402 | Down | -0.3225526375 |
| GSE9593 | Up | 0.1006346968 |
| GSE43922 | Down | -0.1181132009 |
| GSE24585 | Down | -0.5999438031 |
| GSE37065 | Down | -0.1258819463 |
| GSE28863_A1 | Down | -0.1056844287 |
| GSE28863_A2 | Down | -0.0271454900 |
| GSE28863_A3 | Down | -0.1370759430 |
| GSE28863_A4 | Down | -0.2797439445 |
| GSE48662 | Up | 0.7147876671 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025253 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027694 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-92b-5p | MIMAT0004792 | MIRT037793 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038469 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044788 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045147 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
