HCSGD entry for HIST1H2BH
1. General information
| Official gene symbol | HIST1H2BH |
|---|---|
| Entrez ID | 8345 |
| Gene full name | histone cluster 1, H2bh |
| Other gene symbols | H2B/j H2BFJ |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | NAS | cellular_component |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | NAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0032813039 | 0.0761976559 | 0.1547799283 | 0.5210350130 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.8901174366 |
| GSE13712_SHEAR | Up | 1.0935966931 |
| GSE13712_STATIC | Up | 0.2622470699 |
| GSE19018 | Up | 0.0959213494 |
| GSE19899_A1 | Up | 1.1281523970 |
| GSE19899_A2 | Up | 1.0146320809 |
| PubMed_21979375_A1 | Down | -0.6277916696 |
| PubMed_21979375_A2 | Up | 0.6448934597 |
| GSE35957 | Up | 0.3449649469 |
| GSE36640 | Down | -3.3457764415 |
| GSE54402 | Down | -0.6048812447 |
| GSE9593 | Up | 1.1107423281 |
| GSE43922 | Down | -1.9791996221 |
| GSE24585 | Down | -0.0828146447 |
| GSE37065 | Down | -0.1053495415 |
| GSE28863_A1 | Up | 0.0985333628 |
| GSE28863_A2 | Up | 0.5440402013 |
| GSE28863_A3 | Down | -0.1467179122 |
| GSE28863_A4 | Down | -0.2009514621 |
| GSE48662 | Up | 0.7340358559 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027544 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039495 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044418 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
