HCSGD entry for CAPN6
1. General information
| Official gene symbol | CAPN6 |
|---|---|
| Entrez ID | 827 |
| Gene full name | calpain 6 |
| Other gene symbols | CANPX CAPNX CalpM DJ914P14.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001578 | Microtubule bundle formation | IEA ISS | biological_process |
| GO:0004198 | Calcium-dependent cysteine-type endopeptidase activity | IEA | molecular_function |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0005876 | Spindle microtubule | IDA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008017 | Microtubule binding | IEA ISS | molecular_function |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
| GO:0051493 | Regulation of cytoskeleton organization | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7704844117 | 0.8876650659 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0916928984 |
| GSE13712_SHEAR | Down | -0.0776278918 |
| GSE13712_STATIC | Down | -0.1234281099 |
| GSE19018 | Down | -0.0572871993 |
| GSE19899_A1 | Up | 0.0558796461 |
| GSE19899_A2 | Up | 0.0195792424 |
| PubMed_21979375_A1 | Down | -0.0876440031 |
| PubMed_21979375_A2 | Up | 0.1546915629 |
| GSE35957 | Up | 0.0297804504 |
| GSE36640 | Up | 0.0397147498 |
| GSE54402 | Down | -0.0221920953 |
| GSE9593 | Up | 0.0776869534 |
| GSE43922 | Up | 0.0201998186 |
| GSE24585 | Up | 0.1012953458 |
| GSE37065 | Up | 0.0642542770 |
| GSE28863_A1 | Down | -0.0065786591 |
| GSE28863_A2 | Up | 0.0111147912 |
| GSE28863_A3 | Up | 0.1501083114 |
| GSE28863_A4 | Up | 0.0147630802 |
| GSE48662 | Down | -0.0066043349 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
