HCSGD entry for SEH1L
1. General information
| Official gene symbol | SEH1L |
|---|---|
| Entrez ID | 81929 |
| Gene full name | SEH1-like (S. cerevisiae) |
| Other gene symbols | SEC13L SEH1A SEH1B Seh1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000776 | Kinetochore | IDA | cellular_component |
| GO:0000777 | Condensed chromosome kinetochore | IEA | cellular_component |
| GO:0005635 | Nuclear envelope | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006999 | Nuclear pore organization | IMP | biological_process |
| GO:0007077 | Mitotic nuclear envelope disassembly | TAS | biological_process |
| GO:0007080 | Mitotic metaphase plate congression | IMP | biological_process |
| GO:0008645 | Hexose transport | TAS | biological_process |
| GO:0010827 | Regulation of glucose transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015758 | Glucose transport | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0019221 | Cytokine-mediated signaling pathway | TAS | biological_process |
| GO:0031080 | Nuclear pore outer ring | IDA NAS | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0051028 | MRNA transport | IEA | biological_process |
| GO:0051315 | Attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation | IMP | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9187905665 | 0.0159443790 | 0.9999902473 | 0.2461419355 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2517085211 |
| GSE13712_SHEAR | Down | -0.4836845964 |
| GSE13712_STATIC | Down | -0.3125009690 |
| GSE19018 | Down | -0.7633283938 |
| GSE19899_A1 | Down | -0.0717742721 |
| GSE19899_A2 | Up | 0.0199376742 |
| PubMed_21979375_A1 | Up | 0.4900982828 |
| PubMed_21979375_A2 | Down | -0.0917307009 |
| GSE35957 | Down | -0.0829480251 |
| GSE36640 | Down | -1.1824733128 |
| GSE54402 | Up | 0.3270468982 |
| GSE9593 | Down | -0.4358139591 |
| GSE43922 | Up | 0.0136484747 |
| GSE24585 | Down | -0.7345658497 |
| GSE37065 | Down | -0.2364565110 |
| GSE28863_A1 | Down | -0.1385573881 |
| GSE28863_A2 | Up | 0.1682610218 |
| GSE28863_A3 | Down | -0.6856318453 |
| GSE28863_A4 | Up | 0.2615494644 |
| GSE48662 | Down | -0.3738241806 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-210-3p | MIMAT0000267 | MIRT003158 | immunoprecipitaion//Microarray//qRT-PCR | Functional MTI (Weak) | 19826008 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031586 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
